MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Gemella sp.
19428wG2_WT2a
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 412
bases: 1,521,208 bps
CDS: 1,728
rRNA: 18
tRNA: 55
tmRNA: 1
Total number of protein coding genes annotated/found:
1,700
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5020|JADGKU010000001.1
MBF0746334.1
Genome Viewer
NA
AA
183/61
280612-280794
hypothetical protein
SEQF5020|JADGKU010000001.1
MBF0746333.1
Genome Viewer
NA
AA
627/209
280042-279416
guanylate kinase
SEQF5020|JADGKU010000001.1
MBF0746332.1
Genome Viewer
NA
AA
198/66
279403-279206
DNA-directed RNA polymerase subunit omega
SEQF5020|JADGKU010000001.1
MBF0746331.1
Genome Viewer
NA
AA
1137/379
277815-276679
class I SAM-dependent RNA methyltransferase
SEQF5020|JADGKU010000001.1
MBF0746330.1
Genome Viewer
NA
AA
516/172
276666-276151
Rrf2 family transcriptional regulator
SEQF5020|JADGKU010000001.1
MBF0746329.1
Genome Viewer
NA
AA
447/149
276103-275657
flavodoxin domain-containing protein
SEQF5020|JADGKU010000001.1
MBF0746328.1
Genome Viewer
NA
AA
1887/629
275509-273623
tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG
SEQF5020|JADGKU010000001.1
MBF0746327.1
Genome Viewer
NA
AA
711/237
273630-272920
16S rRNA (guanine(527)-N(7))-methyltransferase RsmG
SEQF5020|JADGKU010000001.1
MBF0746326.1
Genome Viewer
NA
AA
1062/354
272762-271701
PTS transporter subunit IIC
SEQF5020|JADGKU010000001.1
MBF0746325.1
Genome Viewer
NA
AA
1992/664
271578-269587
methionine--tRNA ligase
SEQF5020|JADGKU010000001.1
MBF0746324.1
Genome Viewer
NA
AA
624/208
269444-268821
nitroreductase family protein
SEQF5020|JADGKU010000001.1
MBF0746323.1
Genome Viewer
NA
AA
363/121
268479-268117
single-stranded DNA-binding protein
SEQF5020|JADGKU010000001.1
MBF0746322.1
Genome Viewer
NA
AA
384/128
268016-267633
dihydroneopterin aldolase
SEQF5020|JADGKU010000001.1
MBF0746321.1
Genome Viewer
NA
AA
480/160
267636-267157
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase
SEQF5020|JADGKU010000001.1
MBF0746320.1
Genome Viewer
NA
AA
996/332
267164-266169
tRNA dihydrouridine synthase DusB
SEQF5020|JADGKU010000001.1
MBF0746319.1
Genome Viewer
NA
AA
705/235
266135-265431
CPBP family intramembrane metalloprotease
SEQF5020|JADGKU010000001.1
MBF0746318.1
Genome Viewer
NA
AA
1140/380
265417-264278
MFS transporter
SEQF5020|JADGKU010000001.1
MBF0746317.1
Genome Viewer
NA
AA
849/283
263410-264258
RluA family pseudouridine synthase
SEQF5020|JADGKU010000001.1
MBF0746316.1
Genome Viewer
NA
AA
2580/860
263267-260688
AAA family ATPase
SEQF5020|JADGKU010000001.1
MBF0746315.1
Genome Viewer
NA
AA
546/182
260643-260098
N-acetyltransferase
Items 1 - 20
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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